Other Resources

There are a few very good online guides on reproducible research.

Perhaps the most comprehensive one is The Turing way from the Alan Turing institute. This page contains information and guidelines about most of the things you need to know about reproducible research and we encourage everyone to skim through this site. They also have a template repo that might be relevant.

Another relevant project is Papers with code which is probably more targeted machine learning projects. The also have a pretty comprehensive guide at paperswithcode/releasing-research-code.

Getting inspiration from other project is often a good way. Papers with code also has a web page where you can search for papers with code. For example you, could try to search for FEniCS and you will get a list of projects where FEniCS is mentioned.